A. Life Sciences Publications in Journals

2007 (Sept)

Hypoxia promotes leakiness in endothelium:Nitric oxide-cGMP shields the endothelial cells from hypoxia-mediated leakiness -Gopi Krishna Kolluru,Tamilarasan KP, Arun S Rajkumar, Geetha Priya Subramaniam, Megha Rajaram,Niyas K Saleem, Syamantak Majumder, Jaffar Ali BM, Illavazagan G, Suvro Chatterjee European Journal of Cell Biology, in press.

Activated pericyte attenuates endothelial functions: Nitric oxide/cGMP rescues activated percyte associated endothelial dysfunctions.Syamantak Majumder, K.P.Tamilarasan, Gopi Krishna Kolluru, Ajit Muley, C.Madhavan Nair, Athira Omanakuttan,K.V.G.K.Murty and Suvro Chatterjee. Biochemistry and Cell biology (in press).

Kadalmani K, Deepa S, Bagavathi S, Anishetty S, Thangaraj K, Gajalakshmi P. Independent origin of 185delAG BRCA1 mutation in an Indian family. Neoplasma. 2007;54(1):51-6. PMID: 17203892 [PubMed - indexed for MEDLINE]

Gajalakshmi P, Natarajan TG, Selvi Rani D, Thangaraj K.A novel BRCA1 mutation in an Indian family with hereditary breast/ovarian cancer. Breast Cancer Res Treat. 2007 Jan;101(1):3-6. Epub 2006 Nov 28. PMID: 17131039 [PubMed - indexed for MEDLINE]

N. Rameshbabu, T.S. Sampath Kumar, T.G. Prabhakar, V.S.Sastry, K.V.G.K. Murty, K. Prasada Rao. Antibacterial nanosized silver substituted hydroxyapatite: synthesis and characterization J.Biomed. Mat. Res. 80A (2007) 581-591

Kang­-Decker N, Cao S, Chatterjee S, Yao J, Egan LJ, Semela D, Mukhopadhyay D, Shah V. (2007) Nitric oxide promotes endothelial cell survival signaling through S-nitrosylation and activation of dynamin-­2. J Cell Sci 120:492­501


M.Sankar, C.Madhavan Nair, K.V.G.K.Murty, P.Manikandan. Transesterification of cyclic carbonates with methanol at ambient conditions over tungstate-based solid catalysts. Appl. Catalysis A, 312, 108-114

Bibekananda Sundaray,V. Subramanian,T. S. Natarajan and K Krishnamurthy. Electrical conductivity of a single electrospun fiber of poly (methyl methacrylate) and multiwalled carbon nanotube nanocomposites. Appl.Phys. Lett., 88, 143114-1-143114-3. */Also selected for publication in April 17, 2006 issue of Virtual Journal of Nanoscale Science & Technology, vol-13, Issue-15/*

Iwakiri Y, Satoh A, Chatterjee S, Toomre DK, Chalouni CM, Fulton D, Groszmann RJ, Shah VH, Sessa WC. (2006) Nitric oxide synthase generates nitric oxide locally to regulate compartmentalized protein S­nitrosylation and protein trafficking. Proc Natl Acad Sci U S A. Dec 26;103(52):19777­-82

K.P. Tamilarasan, Gopi Krishna Kolluru, Megha Rajaram, M.Indhumathy, R.Saranya, Chatterjee S (2006). Thalidomide attenuates nitric oxide mediated angiogenesis by blocking migration of endothelial cells. BMC Cell Biol. 4;7:17.

Kolluru GK, Tamilarasan KP, Geetha Priya S, Durgha NP, Chatterjee S (2006) Cadmium induced endothelial dysfunctions: Consequence of defective migratory pattern of endothelial cells in association with poor nitric oxide availability under cadmium challenge. Cell Biol. Int. 30(5): 427-­38.

Perri R, Langer DA, Chatterjee S, Gibbons SJ, Gadgil J, Farrugia G, Shah V (2006) Defects in cGMP-­PKG pathway contribute to impaired NO dependent relaxation in activated hepatic stellate cells. Am J Physiol Gastrointest Liver Physiol. 290(3):G535-42.

Yuan, X, Hu, Z.Z., Wu, H.T., Torii, M, Narayanaswamy, M, Ravikumar, K.E., Vijay­ Shanker, K, Wu, C.H. (2006) 'An online literature mining tool for protein phosphorylation.' Bioinformatics, Vol.22, No.13, pp.1668­1669


C.Madhavan Nair, C Sabna, K.V.G.K.Murty, S.V.Ramanan. Permeability of R6G across Cx 43 hemichannels through a novel combination of patch clamp and surface enhanced Raman spectroscopy. Pramana, 65(4), 653-661

Lee J.S., Decker NK, Chatterjee S, Yao J, Friedman S, Shah V (2005) Mechanisms of nitric oxide interplay with Rho GTPase family members in modulation of actin membrane dynamics in pericytes and fibroblasts. Am J. Pathol. 166:1861­-1870.

S.V. Ramanan, V. Valiunas, P.R.Brink , Non-Stationary Fluctuation Analysis of Macroscopic Gap Junction Channel Records, J. Membrane Biol., 205, 81-88, Sept.2005

M. Naraya naswamy, KERavi-kumar, K. Vijay-Shanker “Beyond the clause: extraction phosphorylation information from Medline”, Bioinformatics, 21(Suppl. 1):i319-327 abstracts, 2005.

Hu, Z. Z., Narayanaswamy, M., Ravikumar, K.E., Vijay­Shanker, K., and Wu, C. H., 'Literature Mining and Database Annotation of Protein Phosphorylation Using a Rule­ Based System.' Bioinformatics , Vol.21, No.11, pp.2759­2765


K. V. G. K. Murty, T. Manisekharan and T. K. K. Srinivasan. Vibrational spectroscopic investigations of 4-alkyl 40-cyano biphenyls [CnH2nž1-C6H5-C6H5-CN, n =9, 10 AND 11] Mol. Cryst. Liq. Cryst (accepted for publication)

Lim I, Strege PR, Gibbons SJ, Lyford GL, Miller SM, Sarr MG, Chatterjee S, Shah V, Farrugia G (2004) Carbon monoxide activates human intestinal smooth muscle L-­type Ca ++ channels through a nitric oxide dependent mechanism. Am J. Physiol. 288:G7-G14


Single Particle Tracking of Correlated Bacterial Dynamics -G.V.Soni, B.M.Jaffar Ali, Y.Hatwalne and G.V.Shivashankar Biophys. J. 84 (2003) 2634-2637

J. Prikulis, K.V.G.K.Murty, H.Olin and M.Käll. Large-area topography analysis and near-field Raman spectroscopy using bent fibre probes. Journal of Microscopy, 210 (3) 269-273


E. J. Bjerneld, K. V. G. K. Murty, J. Prikulis and M. Käll. Laser-focused silver growth at the glass-water interfaces. CHEMPHYSCHEM, 3 (1), 116-119.

P. Gajalakshmi, A. Balasundaram, P. Venkatesan, S.T. Santhiya, A. Ramesh., Cytogenetic studies on spray painters in South India, Mutation Research 514 (2002) 1-6

P. Gajalakshmi, Protima Mallick, P. Venkatesan, S. T. Santhiya A. Ramesh., Studies on Sister Chromatid Exchanges in Peripheral lymphocytes of Spray Painters. Journal of Environmental Pathology, Toxicology, Oncology 21(1) (2002) 63-65.

Sharmila Ani-shetty, Gautam Pennathur and Ramesh Anishetty, “Tripeptide analysis of protein structures” BMC Structural Biology 2002, 2:9, dec.2002

B. Life Sciences papers in Conferences

2007 (Sept)

Nagaraj C., Rajkumar A.S., Rahman M.J., Ramanan S.V. and Jaffar Ali B.M. ‘Development of an instrument combining optical nanomanipulation with single cell electrophysiology to study cell membrane remodeling.’ National Review and Coordination Meeting on Nanoscience and Nanotechnology (NS&NT 2007), 21-23 February 2007, Hyderabad, p.48

Rajkumar A.S., Muley A., Chatterjee S., and Jaffar Ali B.M. ‘Study of Cellular Microrheology by Optical Tweezers.’ Proceedings of Assembly, Organization, and Propulsion of Complex Systems (AOPCS) 2007, 22-24 February 2007, Chennai, p.84

Rajkumar A.S. and Jaffar Ali B.M. ‘Microrheology of Biopolymers by Optical Tweezers.’ Proceedings of Assembly, Organization, and Propulsion of Complex Systems (AOPCS) 2007, 22-24 February 2007, Chennai, p.85

Chatterjee S. “Pericytes cross talk with endothelial cells: Nitric oxide reverses inhibitory effects of pericytes on endothelial cells”. Gordon Conference Nitric Oxide 2007 Ventura, CA, February 4-9, 2007.


Rajkumar A.S., Chatterjee S. and Jaffar Ali B.M ‘A Simplified Method To Determine Cell Membrane Tension Using Optical Nanomanipulation’ ICONSAT 2006, 15-17 February 2006, p.401 (ASR submitted MS by Research synopsis of thesis)

Gopi Krishna Kolluru and Chatterjee S. Nitric Oxide implicates in Cadmium induced endothelial dysfunctions: A basis for Cadmium mediated cardiovascular anomalies. Joint Annual Meeting of International Society of Heart Research (ISHR) and International Academy of Cardiovascular Sciences (IACS), Chennai, 12-14 January 2006

Chatterjee, S. Nitric Oxide Implications in High Altitude induced Pulmonary Edema, DIPAS, Defence Research and Development Organization (DRDO), Delhi, 21 January 2006

Chatterjee, S. (Jan 6,2006) A Cellular basis of Nitric Oxide Implications in High Altitude induced Pulmonary Edema, V Annual conference of Society for Free Radical Research in India (SFRR), Kolkata, 17-19 January 2006.

M. Rajaram, S.Deepa, K.P.Tamilarasan, K.Thangar, P.Gajalakshmi “A novel BRCA1 mutation in an Indian family with hereditary breast ovarian cancer” at International Symposium on Genetics and Biotechnology, Vol I, page no 20, January 2006.


Rajkumar A.S., Muley A., Chatterjee S., and Jaffar Ali B.M. ‘Remodeling Of Membrane Fluidity By Cholestrol Incorporation Studied By Optical Tweezers.’ Proceedings of 2nd Annual BRSI Convention, 24-26 November 2005, p.50 (ASR submitted MS by Research synopsis of thesis).

“A novel surface enhanced Raman spectroscopic investigation of the gene BRCA1 exon 2 implicated in breast cancer C.Madhavan Nair, P.Gaja Lakshmi, K.V.G.K.Murty Second Convention, Biotech Research Society of INDIA, Nov. 2005, Chennai, INDIA

S. Geetha Priya, K.P.Tamilarasan, Gopi Krishna Kolluru and Chatterjee S. Thalidomide interferes with nitric oxide signaling of angiogenesis. International symposium on translational research - Apoptosis and Cancer, Trivandrum, 18-21 December 2005.

Chatterjee S. Time, Space and Nitric Oxide: The three dimensions of NOS (Invited Lecture) IV Annual conference of Society for Free Radical Research in India (SFRR), Bangalore, 10-12 January 2005

Durga NP,Tamilarasan KP, Chatterjee S. Overexpression of connexin 43 attenuates nitric oxide production in endothelial cells: An epiphenomenon of cell density dependent eNOS distribution in endothelial cells IV Annual conference of Society for Free Radical Research in India (SFRR), Bangalore, 10-12 January 2005

C. Madhavan Nair, C. Sabna, S. V. Ramanan, K. V. G. K. Murty, B. M. Jaffar Ali and P. Gautam, “Permeability of R6G across Cx43 hemichannels through a novel combination of patch clamp and SERS” at First National Conference on Nanoscience and Technology, March 2005.


Simulation of Heat Shock Response in E.Coli: Systematic Analysis of Network Behaviour’, Rajesh S. and B.M. Jaffar Ali Satellite Meeting of STATPHYS 22 on ‘Complex Networks: Structure, Function and Processes’, STATPHYS KOLKATTA V, India. June 2004.

“A Study on Hereditary Breast Cancer Patients - Bioinformatic and Experimental approaches” K.Kadalmani, Sharmila Anishetty, S.Bagavathi and P.Gajalakshmi. Presented at Indo-Aus Conference on Biotechnology in Medicine, Feb9-11, 2004.

“Ionic Concentrations in a Steady State Model of Vascular Smooth Muscle Cells” B. M. Masood & S. V. Ramanan. In the Proceeding of the Biophysical Society Meeting, Baltimore 2004, Vol 86, No. 1. part 2 of 2, Pos-L85, Feb. 2004.

“Screening for BRCA1 mutations in hereditary breast cancer patients in Tamil Nadu” K.Kadalmani, S.Bagavathi, Sharmila Anishetty, and P.Gajalakshmi, at International Workshop on "Cervical Cancer" conducted by National Centre for Biological Sciences,Bangalore, November 2004.

Ravikumar, K.E., Nara-yanaswamy, M., Vijay-Shanker, K. “Towards Building a Database of Phosphorylate Interactions: Extracting Infor-mation from the Literature” . Proc SCI,USA, 2004.




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